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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Angel Ulloa | 24th | Frank Fraire | Tied for 26th | 25th |
| First Basemen | Wen-huan Niu | 20th | Orlando Reyes | 15th | 17th |
| Second Basemen | Craig Lightsey | 21st | Alexis Larosa | 1st | 12th |
| Third Basemen | Manny Venzor | 18th | Jack Honeyman | Tied for 18th | 18th |
| Shortstops | Travis Glazebrook | 20th | Gil Jave | 8th | 10th |
| Left Fielders | Marco Feron | Tied for 21st | Dalian Bembé | 9th | 20th |
| Center Fielders | 29th | Bryan Kramb | 21st | 30th | |
| Right Fielders | Finn West | 20th | B.J. Reinshagen | 13th | 14th |
| Starting Pitchers | James Wilkinson | 30th | Abraham Plancarte | 7th | 27th |
| Relievers | Manny Arango | 23rd | Rickey Cancino | Tied for 21st | 25th |
| Closers | Manny Arango | 27th | Rickey Cancino | 17th | 21st |
