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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Allen Santos | 20th | Randy Cavazos | 2nd | 18th |
| First Basemen | Osmel Rivera | 17th | Martin Miles | 29th | 26th |
| Second Basemen | Minoru Kume | 19th | Walter Vaive | 7th | 21st |
| Third Basemen | Tied for 29th | Trevor McBeal | 21st | 30th | |
| Shortstops | Chaim Dijkstra | 7th | Zane Chwalek | 18th | 6th |
| Left Fielders | Paul Rees | 20th | Jose Ronda | 12th | 20th |
| Center Fielders | T.J. Gourley | 25th | Adam Sproul | Tied for 19th | 22nd |
| Right Fielders | Yuan Zhu | 17th | Jon Velez | 10th | 13th |
| Starting Pitchers | Jose Madrid | 21st | Josh Menendez | 14th | 19th |
| Relievers | Manny Arango | 19th | Zach Tomory | 5th | 16th |
| Closers | Manny Arango | 21st | Zach Tomory | Tied for 14th | 21st |
